Index

A

add_color_selector_tab() (fusion_tools.components.maps.ChannelMixer method), [1] add_filter() (fusion_tools.components.tools.OverlayOptions method), [1] add_labels_to_structures() (fusion_tools.components.segmentation.BulkLabels method) add_manual_roi() (fusion_tools.components.maps.SlideMap method), [1] add_metadata() (fusion_tools.handler.dsa_handler.DSAHandler method) add_new_class_label() (fusion_tools.components.segmentation.FeatureAnnotation method) add_new_image() (fusion_tools.tileserver.LocalTileServer method)

add_plugin() (fusion_tools.handler.dsa_handler.DSAHandler method) add_row_custom_metadata() (fusion_tools.handler.dataset_uploader.DSAUploader method) add_structure_line_color() (fusion_tools.components.tools.OverlayOptions method), [1] adv_update_overlays() (fusion_tools.components.tools.OverlayOptions method), [1] align_object_props() (in module fusion_tools.utils.shapes) apply_labels() (fusion_tools.components.segmentation.BulkLabels method) authenticate_new() (fusion_tools.handler.dsa_handler.DSAHandler method)

B

BulkLabels (class in fusion_tools.components.segmentation)

C

cancel_job() (fusion_tools.handler.dsa_handler.DSAHandler method) ChannelMixer (class in fusion_tools.components.maps), [1] check_for_uploader() (fusion_tools.visualization.components.Visualization method) ClassificationDataset (class in fusion_tools.dataset) collection_selection() (fusion_tools.handler.dataset_builder.DatasetBuilder method) color_features() (in module fusion_tools.feature_extraction) convert_histomics() (in module fusion_tools.utils.shapes) create_class_label() (fusion_tools.components.segmentation.FeatureAnnotation method) create_dataset_builder() (fusion_tools.handler.dsa_handler.DSAHandler method)

create_layer_from_filter() (fusion_tools.components.tools.OverlayOptions method), [1] create_login_component() (fusion_tools.handler.dsa_handler.DSAHandler method) create_metadata_table() (fusion_tools.handler.dsa_handler.DSAHandler method) create_new_user() (fusion_tools.handler.dsa_handler.DSAHandler method) create_plugin_progress() (fusion_tools.handler.dsa_handler.DSAHandler method) create_survey() (fusion_tools.handler.dsa_handler.DSAHandler method) create_upload_component() (fusion_tools.handler.dataset_uploader.DSAUploader method) create_uploader() (fusion_tools.handler.dsa_handler.DSAHandler method) create_user_folder() (fusion_tools.handler.dsa_handler.DSAHandler method) CustomTileServer (class in fusion_tools.tileserver)

D

DatasetBuilder (class in fusion_tools.handler.dataset_builder) detect_geojson() (in module fusion_tools.utils.shapes) detect_histomics() (in module fusion_tools.utils.shapes) display_login_fields() (fusion_tools.handler.login.DSALoginComponent method) distance_transform_features() (in module fusion_tools.feature_extraction) download_data() (fusion_tools.components.segmentation.BulkLabels method) download_manual_roi() (fusion_tools.components.maps.SlideMap method), [1] DSAHandler (class in fusion_tools.handler.dsa_handler)

DSALoginComponent (class in fusion_tools.handler.login) DSAPluginProgress (class in fusion_tools.handler.plugin) DSAPluginRunner (class in fusion_tools.handler.plugin) DSASurvey (class in fusion_tools.handler.survey) DSATileServer (class in fusion_tools.tileserver) DSATool (class in fusion_tools.handler) DSAUploader (class in fusion_tools.handler.dataset_uploader) DSAUploadHandler (class in fusion_tools.handler.dataset_uploader) DSAUploadType (class in fusion_tools.handler.dataset_uploader)

E

enable_submit_metadata() (fusion_tools.handler.dataset_uploader.DSAUploader method) enable_upload_done() (fusion_tools.handler.dataset_uploader.DSAUploader method) export_annotations() (in module fusion_tools.utils.shapes) export_configs() (fusion_tools.dataset.ClassificationDataset method) (fusion_tools.dataset.SegmentationDataset method) export_image_overlay_bounds() (fusion_tools.components.maps.SlideMap method), [1] export_layers() (fusion_tools.components.tools.OverlayOptions method), [1] extract_all_properties() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1]

extract_data_from_features() (fusion_tools.components.tools.PropertyPlotter method), [1] extract_features() (fusion_tools.feature_extraction.ParallelFeatureExtractor method) extract_geojson_properties() (in module fusion_tools.utils.shapes) extract_listed_prop() (in module fusion_tools.utils.shapes) extract_nested_prop() (in module fusion_tools.utils.shapes) extract_path_parts() (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) extract_property() (fusion_tools.components.tools.PropertyPlotter method), [1] extract_property_info() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1]

F

FeatureAnnotation (class in fusion_tools.components.segmentation) find_executable_input() (fusion_tools.handler.plugin.DSAPluginRunner method) find_intersecting() (in module fusion_tools.utils.shapes) find_nested_levels() (in module fusion_tools.utils.shapes) find_tissue() (fusion_tools.dataset.FUSIONDataset method) (fusion_tools.dataset.SegmentationDataset method) fusion_tools module fusion_tools.components module fusion_tools.components.maps module, [1] fusion_tools.components.segmentation module fusion_tools.components.tools module, [1] fusion_tools.dataset module fusion_tools.feature_extraction module fusion_tools.handler module fusion_tools.handler.dataset_builder module

fusion_tools.handler.dataset_uploader module fusion_tools.handler.dsa_handler module fusion_tools.handler.login module fusion_tools.handler.plugin module fusion_tools.handler.survey module fusion_tools.tileserver module fusion_tools.utils module, [1] fusion_tools.utils.shapes module fusion_tools.visualization module fusion_tools.visualization.components module fusion_tools.visualization.vis_utils module FUSIONDataset (class in fusion_tools.dataset)

G

gen_collections_dataframe() (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) gen_header_components() (fusion_tools.visualization.components.Visualization method) gen_image_mover() (fusion_tools.components.maps.SlideMap method), [1] gen_layout() (fusion_tools.components.maps.ChannelMixer method), [1] (fusion_tools.components.maps.MultiFrameSlideMap method), [1] (fusion_tools.components.maps.SlideMap method), [1] (fusion_tools.components.segmentation.BulkLabels method) (fusion_tools.components.segmentation.FeatureAnnotation method) (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] (fusion_tools.components.tools.HRAViewer method), [1] (fusion_tools.components.tools.OverlayOptions method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] (fusion_tools.components.tools.PropertyViewer method), [1] (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) (fusion_tools.handler.login.DSALoginComponent method) (fusion_tools.handler.plugin.DSAPluginProgress method) (fusion_tools.handler.plugin.DSAPluginRunner method) (fusion_tools.handler.survey.DSASurvey method) (fusion_tools.visualization.components.Visualization method) gen_metadata_table() (fusion_tools.handler.dataset_uploader.DSAUploader method) gen_scatter_plot() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] gen_selected_div() (fusion_tools.components.tools.PropertyPlotter method), [1] gen_slide_patches() (fusion_tools.dataset.ClassificationDataset method) (fusion_tools.dataset.FUSIONDataset method) (fusion_tools.dataset.SegmentationDataset method) gen_umap_cols() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] gen_violin_plot() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] generate_plot() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] generate_plot_tabs() (fusion_tools.components.tools.PropertyViewer method), [1] generate_plugin_table() (fusion_tools.handler.plugin.DSAPluginProgress method) generate_property_dict() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] get() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) get_after() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) get_annotation_names() (fusion_tools.handler.dsa_handler.DSAHandler method) get_annotations() (fusion_tools.handler.dsa_handler.DSAHandler method) (fusion_tools.tileserver.LocalTileServer method) get_bbox() (fusion_tools.feature_extraction.ParallelFeatureExtractor method) get_before() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) get_callbacks() (fusion_tools.components.maps.ChannelMixer method), [1] (fusion_tools.components.maps.SlideMap method), [1] (fusion_tools.components.segmentation.BulkLabels method) (fusion_tools.components.segmentation.FeatureAnnotation method) (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] (fusion_tools.components.tools.HRAViewer method), [1] (fusion_tools.components.tools.OverlayOptions method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] (fusion_tools.components.tools.PropertyViewer method), [1] (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) (fusion_tools.handler.login.DSALoginComponent method) (fusion_tools.handler.plugin.DSAPluginProgress method) (fusion_tools.handler.plugin.DSAPluginRunner method) (fusion_tools.handler.survey.DSASurvey method) (fusion_tools.visualization.components.Visualization method)

get_click_popup() (fusion_tools.components.maps.SlideMap method), [1] get_clicked_part() (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) get_collection_slide_count() (fusion_tools.handler.dsa_handler.DSAHandler method) get_collections() (fusion_tools.handler.dsa_handler.DSAHandler method) get_component_indices() (fusion_tools.handler.dataset_builder.DatasetBuilder method) get_executable_dict() (fusion_tools.handler.plugin.DSAPluginRunner method) get_file_info() (fusion_tools.handler.dsa_handler.DSAHandler method) get_folder_folders() (fusion_tools.handler.dsa_handler.DSAHandler method) get_folder_info() (fusion_tools.handler.dsa_handler.DSAHandler method) get_folder_rootpath() (fusion_tools.handler.dsa_handler.DSAHandler method) get_folder_slides() (fusion_tools.handler.dsa_handler.DSAHandler method) get_image_bounds() (fusion_tools.components.maps.SlideImageOverlay method), [1] get_image_overlay_popup() (fusion_tools.components.maps.SlideMap method), [1] get_image_region() (fusion_tools.handler.dsa_handler.DSAHandler method) get_image_thumbnail() (fusion_tools.handler.dsa_handler.DSAHandler method) get_item_info() (fusion_tools.handler.dsa_handler.DSAHandler method) get_layout_children() (fusion_tools.visualization.components.Visualization method) get_logs_or_cancel() (fusion_tools.handler.plugin.DSAPluginProgress method) get_metadata() (fusion_tools.tileserver.LocalTileServer method) get_name_annotations_url() (fusion_tools.tileserver.LocalTileServer method) get_name_metadata_url() (fusion_tools.tileserver.LocalTileServer method) get_name_regions_url() (fusion_tools.tileserver.LocalTileServer method) get_name_tiles_url() (fusion_tools.tileserver.LocalTileServer method) get_names() (fusion_tools.tileserver.LocalTileServer method) get_namespace() (fusion_tools.components.maps.SlideMap method), [1] (fusion_tools.components.segmentation.BulkLabels method) get_next_image() (fusion_tools.dataset.ClassificationDataset method) (fusion_tools.dataset.SegmentationDataset method) get_organ_table() (fusion_tools.components.tools.HRAViewer method), [1] get_path_info() (fusion_tools.handler.dsa_handler.DSAHandler method) get_pattern_matching_value() (in module fusion_tools.visualization.vis_utils) get_region() (fusion_tools.tileserver.LocalTileServer method) get_scale_factors() (fusion_tools.components.maps.SlideMap method), [1] (fusion_tools.components.segmentation.BulkLabels method) (fusion_tools.components.segmentation.FeatureAnnotation method) get_specific_job() (fusion_tools.handler.dsa_handler.DSAHandler method) get_structure_region() (fusion_tools.components.segmentation.FeatureAnnotation method) get_thumbnail() (fusion_tools.tileserver.LocalTileServer method) get_tile() (fusion_tools.tileserver.LocalTileServer method) get_tile_server() (fusion_tools.handler.dsa_handler.DSAHandler method) get_user_jobs() (fusion_tools.handler.dsa_handler.DSAHandler method) GlobalPropertyPlotter (class in fusion_tools.components.tools), [1]

H

Handler (class in fusion_tools.handler)

HRAViewer (class in fusion_tools.components.tools), [1]

I

initialize_stores() (fusion_tools.visualization.components.Visualization method)

L

list_plugins() (fusion_tools.handler.dsa_handler.DSAHandler method) load() (fusion_tools.components.maps.ChannelMixer method), [1] (fusion_tools.components.maps.MultiFrameSlideMap method), [1] (fusion_tools.components.maps.SlideMap method), [1] (fusion_tools.components.segmentation.BulkLabels method) (fusion_tools.components.segmentation.FeatureAnnotation method) (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] (fusion_tools.components.tools.HRAViewer method), [1] (fusion_tools.components.tools.OverlayOptions method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] (fusion_tools.components.tools.PropertyViewer method), [1] (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) (fusion_tools.handler.login.DSALoginComponent method) (fusion_tools.handler.plugin.DSAPluginProgress method) (fusion_tools.handler.plugin.DSAPluginRunner method) (fusion_tools.handler.survey.DSASurvey method)

load_annotations() (fusion_tools.tileserver.LocalTileServer method) (in module fusion_tools.utils.shapes) load_aperio() (in module fusion_tools.utils.shapes) load_geojson() (in module fusion_tools.utils.shapes) load_histomics() (in module fusion_tools.utils.shapes) load_label_mask() (in module fusion_tools.utils.shapes) load_new_jobs() (fusion_tools.handler.plugin.DSAPluginProgress method) load_plugin() (fusion_tools.handler.plugin.DSAPluginRunner method) load_polygon_csv() (in module fusion_tools.utils.shapes) load_visium() (in module fusion_tools.utils.shapes) LocalTileServer (class in fusion_tools.tileserver)

M

make_boundary_mask() (fusion_tools.handler.dsa_handler.DSAHandler method) make_file_component() (fusion_tools.handler.plugin.DSAPluginRunner method) make_file_uploads() (fusion_tools.handler.dataset_uploader.DSAUploader method) make_geojson_layers() (fusion_tools.components.maps.SlideMap method), [1] make_image_and_label() (fusion_tools.dataset.ClassificationDataset method) make_image_and_mask() (fusion_tools.dataset.SegmentationDataset method) make_input_component() (fusion_tools.handler.plugin.DSAPluginRunner method) make_mask() (fusion_tools.feature_extraction.ParallelFeatureExtractor method) make_patch() (fusion_tools.dataset.ClassificationDataset method) (fusion_tools.dataset.SegmentationDataset method) make_property_plot_tabs() (fusion_tools.components.tools.PropertyPlotter method), [1] make_selectable_dash_table() (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) make_selected_slide() (fusion_tools.handler.dataset_builder.DatasetBuilder method) MapComponent (class in fusion_tools.components.maps), [1] merge_dict() (fusion_tools.feature_extraction.ParallelFeatureExtractor method) (in module fusion_tools.utils.shapes) module fusion_tools fusion_tools.components fusion_tools.components.maps, [1] fusion_tools.components.segmentation fusion_tools.components.tools, [1] fusion_tools.dataset fusion_tools.feature_extraction fusion_tools.handler fusion_tools.handler.dataset_builder fusion_tools.handler.dataset_uploader fusion_tools.handler.dsa_handler fusion_tools.handler.login fusion_tools.handler.plugin fusion_tools.handler.survey fusion_tools.tileserver fusion_tools.utils, [1] fusion_tools.utils.shapes fusion_tools.visualization fusion_tools.visualization.components fusion_tools.visualization.vis_utils

morphological_features() (in module fusion_tools.feature_extraction) move_image_overlay() (fusion_tools.components.maps.SlideMap method), [1] MultiFrameSlideMap (class in fusion_tools.components.maps), [1] MultiTool (class in fusion_tools.components.tools), [1]

O

open_header() (fusion_tools.visualization.components.Visualization method) open_header_component() (fusion_tools.visualization.components.Visualization method) open_navbar() (fusion_tools.visualization.components.Visualization method)

organize_folder_contents() (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) OverlayOptions (class in fusion_tools.components.tools), [1]

P

ParallelFeatureExtractor (class in fusion_tools.feature_extraction) parse_added_filters() (fusion_tools.components.tools.OverlayOptions method), [1] parse_executable() (fusion_tools.handler.plugin.DSAPluginRunner method) parse_filter_divs() (fusion_tools.components.segmentation.BulkLabels method) (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] parse_spatial_divs() (fusion_tools.components.segmentation.BulkLabels method) path_to_indices() (in module fusion_tools.utils.shapes) path_to_mask() (in module fusion_tools.utils.shapes) plant_seed() (fusion_tools.dataset.ClassificationDataset method) (fusion_tools.dataset.FUSIONDataset method) (fusion_tools.dataset.SegmentationDataset method) populate_folder_div() (fusion_tools.handler.dataset_uploader.DSAUploader method) populate_new_folder() (fusion_tools.handler.dataset_uploader.DSAUploader method) populate_plugin_inputs() (fusion_tools.handler.plugin.DSAPluginRunner method) populate_processing_plugins() (fusion_tools.handler.dataset_uploader.DSAUploader method)

populate_upload_type() (fusion_tools.handler.dataset_uploader.DSAUploader method) post() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) post_after() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) post_annotations() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) (fusion_tools.handler.dsa_handler.DSAHandler method) post_before() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) post_file_chunk() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) process_annotations() (fusion_tools.dataset.ClassificationDataset method) (fusion_tools.dataset.FUSIONDataset method) (fusion_tools.dataset.SegmentationDataset method) process_filters_queries() (in module fusion_tools.utils.shapes) process_frames() (fusion_tools.components.maps.ChannelMixer method), [1] (fusion_tools.components.maps.MultiFrameSlideMap method), [1] PropertyPlotter (class in fusion_tools.components.tools), [1] PropertyViewer (class in fusion_tools.components.tools), [1]

Q

query_annotation_count() (fusion_tools.handler.dsa_handler.DSAHandler method)

R

read_image_region() (fusion_tools.feature_extraction.ParallelFeatureExtractor method) refresh_labels() (fusion_tools.components.segmentation.BulkLabels method) relative_distance() (in module fusion_tools.feature_extraction) remove_file() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method)

remove_marker_label() (fusion_tools.components.tools.PropertyPlotter method), [1] RequestData (class in fusion_tools.handler.dataset_uploader) root() (fusion_tools.tileserver.LocalTileServer method) run_plugin() (fusion_tools.handler.dsa_handler.DSAHandler method) run_plugin_request() (fusion_tools.handler.plugin.DSAPluginRunner method)

S

save_annotation() (fusion_tools.components.segmentation.FeatureAnnotation method) save_annotation_chunk() (fusion_tools.handler.dataset_uploader.DSAUploadHandler method) save_label() (fusion_tools.components.segmentation.FeatureAnnotation method) save_mask() (fusion_tools.components.segmentation.FeatureAnnotation method) search_labels() (fusion_tools.components.segmentation.BulkLabels method) SegmentationDataset (class in fusion_tools.dataset) select_data_from_plot() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] slide_selection() (fusion_tools.handler.dataset_builder.DatasetBuilder method) SlideImageOverlay (class in fusion_tools.components.maps), [1] SlideMap (class in fusion_tools.components.maps), [1]

spatially_aggregate() (in module fusion_tools.utils.shapes) start() (fusion_tools.feature_extraction.ParallelFeatureExtractor method) (fusion_tools.tileserver.LocalTileServer method) (fusion_tools.visualization.components.Visualization method) sub_select_data() (fusion_tools.components.tools.PropertyPlotter method), [1] submit_create_account() (fusion_tools.handler.login.DSALoginComponent method) submit_login() (fusion_tools.handler.login.DSALoginComponent method) submit_metadata() (fusion_tools.handler.dataset_uploader.DSAUploader method) submit_plugin() (fusion_tools.handler.dataset_uploader.DSAUploader method) (fusion_tools.handler.plugin.DSAPluginRunner method) SurveyType (class in fusion_tools.handler.survey)

T

texture_features() (in module fusion_tools.feature_extraction) threshold_channels() (in module fusion_tools.feature_extraction)

TileServer (class in fusion_tools.tileserver) to_dict() (fusion_tools.components.maps.SlideImageOverlay method), [1] Tool (class in fusion_tools.components.tools), [1]

U

updat_layout() (fusion_tools.components.maps.ChannelMixer method), [1] update_channel_mix() (fusion_tools.components.maps.ChannelMixer method), [1] update_cli_options() (fusion_tools.handler.plugin.DSAPluginRunner method) update_dict_keys() (fusion_tools.feature_extraction.ParallelFeatureExtractor method) update_drop_type() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] update_filter_data() (fusion_tools.components.segmentation.BulkLabels method) update_filter_properties() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] update_filter_selector() (fusion_tools.components.tools.OverlayOptions method), [1] update_folder_div() (fusion_tools.handler.dataset_builder.DatasetBuilder method) update_hra_viewer() (fusion_tools.components.tools.HRAViewer method), [1] update_image_overlay_transparency() (fusion_tools.components.maps.SlideMap method), [1] update_label_properties() (fusion_tools.components.segmentation.BulkLabels method) update_label_structures() (fusion_tools.components.segmentation.BulkLabels method) update_label_table() (fusion_tools.components.segmentation.BulkLabels method) update_layout() (fusion_tools.components.maps.MultiFrameSlideMap method), [1] (fusion_tools.components.maps.SlideMap method), [1] (fusion_tools.handler.dataset_builder.DatasetBuilder method) (fusion_tools.handler.dataset_uploader.DSAUploader method) (fusion_tools.handler.login.DSALoginComponent method) (fusion_tools.handler.plugin.DSAPluginProgress method) (fusion_tools.handler.plugin.DSAPluginRunner method) update_method_explanation() (fusion_tools.components.segmentation.BulkLabels method) update_overlays() (fusion_tools.components.tools.OverlayOptions method), [1]

update_page() (fusion_tools.visualization.components.Visualization method) update_page_layout() (fusion_tools.visualization.components.Visualization method) update_properties_and_filters() (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] update_property_graph() (fusion_tools.components.tools.PropertyPlotter method), [1] update_property_selector() (fusion_tools.components.segmentation.BulkLabels method) (fusion_tools.components.tools.GlobalPropertyPlotter method), [1] update_property_viewer() (fusion_tools.components.tools.PropertyViewer method), [1] update_slide() (fusion_tools.components.maps.ChannelMixer method), [1] (fusion_tools.components.maps.SlideMap method), [1] (fusion_tools.components.segmentation.BulkLabels method) (fusion_tools.components.segmentation.FeatureAnnotation method) (fusion_tools.components.tools.OverlayOptions method), [1] (fusion_tools.components.tools.PropertyPlotter method), [1] (fusion_tools.components.tools.PropertyViewer method), [1] update_spatial_queries() (fusion_tools.components.segmentation.BulkLabels method) update_spatial_query_definition() (fusion_tools.components.segmentation.BulkLabels method) update_structure() (fusion_tools.components.segmentation.FeatureAnnotation method) update_structure_count() (fusion_tools.components.segmentation.BulkLabels method) update_structure_options() (fusion_tools.components.segmentation.FeatureAnnotation method) update_sub_div() (fusion_tools.components.tools.PropertyPlotter method), [1] update_tab_style() (fusion_tools.components.maps.ChannelMixer method), [1] update_vis_session() (fusion_tools.components.maps.SlideMap method), [1] update_vis_store() (fusion_tools.handler.dataset_builder.DatasetBuilder method) upload_shape() (fusion_tools.components.maps.SlideMap method), [1]

V

Visualization (class in fusion_tools.visualization.components)